User:Robert Badgett

Robert Badgett, MD FACP
Director of Clinical Informatics
Professor of Medicine
University of Texas Health Science Center at San Antonio
web page

Eduzendium projects

• CZ:UTHSCSA Internal Medicine residency PIM
• CZ:UTHSCSA MS4 Informatics

Tools to aid in using CZ

Javascript extensions to help editing and reading

• Enhancing your editing with javascript extensions
  • Greasemonkey
• Help_talk:Contents
• Diberi tool for citations

Templates

• {{TOC|right}}
• Template:Related
  • Example of use: Renin-angiotensin system#Components_and_physiology]
• Template:Infobox Disease
• Template:2x2-rx
• Template:ICD9
• Template:MeSH
• Template:MeSHID
• Template:PubMedCentral
• Template:MW-MedicalDictionary
• Template for medical conditions

Information for patients templates

==External links==
* {{MedlinePlus|(Allergic rhinitis)}}

• Template:MedlinePlus
  • Example of use: Allergic rhinitis
  • Example of use: Doxycycline

Pharmacology templates

In [[oncology]], '''carboplatin''' is an "organoplatinum compound that possesses antineoplastic activity."<ref>{{MeSH}}</ref>

==History==
Dabigatran was approved for use by the [http://www.emea.europa.eu European Medicines Agency] in 2009 for "to prevent the formation of blood clots in the veins in adults who have had an operation to replace a hip or knee."<ref>Anonymous (2009) [http://www.emea.europa.eu/humandocs/Humans/EPAR/pradaxa/pradaxa.htm EPARs for authorised medicinal products for human use] European Medicines Agency</ref>

==History==
Flomax brand of tamsulosin was approved by the [[Food and Drug Administration]] in the [[United States]] with a [http://www.fda.gov/Drugs/DevelopmentApprovalProcess/HowDrugsareDevelopedandApproved/ApprovalApplications/NewDrugApplicationNDA/ New Drug Application] (NDA) in 1997.<ref>{{FDA-Drug_Details|020579}}</ref> A generic version with a AB [[Food and Drug  Administration/Catalogs/Therapeutic Equivalence Code|Therapeutic Equivalence Code]] was approved with a [http://www.fda.gov/Drugs/DevelopmentApprovalProcess/HowDrugsareDevelopedandApproved/ApprovalApplications/AbbreviatedNewDrugApplicationANDAGenerics/ Abbreviated New Drug Application] (ANDA) in 2007.<ref>{{FDA-Drug_Details|077451}}</ref>

==Pharmacology==
===Administration===
===Distribution===
===Metabolism===
===Excretion===
===Toxicity===
[[Drug toxicity]] includes

==External links==
{{CZMed}}

==References==
<references/>

Template to create biomedical citations

Enter a PMID, DOI, or PubMed Central ID into http://clinical.uthscsa.edu/cite

Other similar tools:

• http://toolserver.org/~verisimilus/Scholar/Cite.php (similar to diberri)
• http://en.wikipedia.org/wiki/Wikipedia:SCHOLAR (uses Greasemonkey script)
• http://tools.wikimedia.pl/~holek/isbn.php
• http://en.wikipedia.org/wiki/Wikipedia:Citation_tools

Documentation on writing templates

• General help
• ParserFunctions
• StringFunctions
• Math
  • Math markup
  • http://en.wikipedia.org/wiki/Help:Displaying_a_formula
  • http://en.wikipedia.org/wiki/Wikipedia:Manual_of_Style_(mathematics)

Evidence tables

{| class="wikitable"
|+ [[Randomized controlled trial]]s
! rowspan="2"|Trial!!rowspan="2"| Patients!!rowspan="2"| Intervention!!rowspan="2"|Comparison !!rowspan="2"|Outcome!!colspan="2"|Results
|-<br/>
! Intervention!!Control
|-
| cell || cell|| cell||Placebo|| cell|| cell|| cell
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| cell || cell|| cell||Placebo|| cell|| cell|| cell
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| cell || cell|| cell||Placebo|| cell|| cell|| cell
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| cell || cell|| cell||Placebo|| cell|| cell|| cell
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| cell || cell|| cell||Placebo|| cell|| cell|| cell
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| cell || cell|| cell||Placebo|| cell|| cell|| cell
|}

{| class="wikitable"
|+ Diagnosis
! Finding!! [[Sensitivity and specificity|Sensitivity]]!! [[Sensitivity and specificity|Specificity]]
|-
| cell || cell|| cell
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| cell || cell|| cell
|}

Selected topics I have contributed to

Anatomical pages

• Body region/Related Articles

Medical procedures pages

• Puncture/Related Articles

References for writing medical articles

Anatomy

Gray, Henry David (1918). Anatomy of the Human Body, 20th edition. Philadelphia: Lea & Febiger. ISBN 1-58734-102-6. 

<ref name="isbn1-58734-102-6">{{cite book |author=Gray, Henry David |title=Anatomy of the Human Body|edition=20th edition |publisher=Lea & Febiger |location=Philadelphia |url=http://www.bartleby.com/107/|year=1918|chapter=|chapterurl= |pages= |isbn=1-58734-102-6 |oclc= |doi=}}</ref>

Pharmacology references

(2006) Keith Parker; Laurence Brunton; Goodman, Louis Sanford; Lazo, John S.; Gilman, Alfred: Goodman & Gilman's The Pharmacological Basis of Therapeutics, 11th. New York: McGraw-Hill. ISBN 0-07-142280-3. 

<ref name="0-07-142280-3">{{cite book |author= |authorlink= |editor=Keith Parker; Laurence Brunton; Goodman, Louis Sanford; Lazo, John S.; Gilman, Alfred |others= |title=Goodman & Gilman's The Pharmacological Basis of Therapeutics |edition=11th |chapter= |chapterurl= |language= |publisher=McGraw-Hill |location=New York |year=2006 |origyear= |pages= |quote= |isbn=0-07-142280-3 |oclc= |doi= |url=http://www.accessmedicine.com/resourceTOC.aspx?resourceID=28 |accessdate=}}</ref>

Masters, Susan B.; Katzung, Bertram G.; Trevor, Anthony J. (2009). Basic and Clinical Pharmacology, 11th. New York: McGraw-Hill Medical. ISBN 0-07-160405-7. 

<ref name="isbn0-07-160405-7">{{cite book |author=Masters, Susan B.; Katzung, Bertram G.; Trevor, Anthony J. |authorlink= |editor= |others= |title=Basic and Clinical Pharmacology |edition=11th| |chapter= |chapterurl= |language= |publisher=McGraw-Hill Medical |location=New York |year=2009 |origyear= |pages= |quote= |isbn=0-07-160405-7 |oclc= |doi= |url=http://www.accessmedicine.com/resourceTOC.aspx?resourceID=16 |accessdate=}}</ref>

Katzung, Bertram G. (2006). Basic and Clinical Pharmacology, 10th. New York: McGraw-Hill Medical Publishing Division. ISBN 0-07-145153-6. 

<ref name="isbn0-07-145153-6">{{cite book |author=Katzung, Bertram G. |authorlink= |editor= |others= |title=Basic and Clinical Pharmacology |edition=10th |chapter= |chapterurl= |language= |publisher=McGraw-Hill Medical Publishing Division |location=New York |year=2006 |origyear= |pages= |quote= |isbn=0-07-145153-6 |oclc= |doi= |url=http://www.accessmedicine.com/resourceTOC.aspx?resourceID=16 |accessdate=}}</ref>

Dean L (2007). PubMed Clinical Q&A. Bethesda (MD): National Library of Medicine (US), National Center for Biotechnology Information. “Based on http://www.ohsu.edu/drugeffectiveness/” 

<ref name="PubmedClinicalQ&A">{{cite book |author=Dean L |authorlink= |editor= |others= |title= PubMed Clinical Q&A |edition= |chapter= |chapterurl= |language= |publisher=National Library of Medicine (US), National Center for Biotechnology Information |location=Bethesda (MD) |year=2007 |origyear= |pages= |quote=Based on http://www.ohsu.edu/drugeffectiveness/ |isbn= |oclc= |doi= |url=http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=ebm |accessdate=}}</ref>

Thompson's Micromedex

Instructions for citing are at http://www.micromedex.com/about_us/legal/cite/

WHO: International Nonproprietary Names

Biochemistry references

Robert K. Murray, Daryl K. Granner, Victor W. Rodwell (2006). Harper’s illustrated biochemistry, 27th. New York: Lange Medical Books/McGraw-Hill. LCC QP514 .R4.  LCCN 2003-029

<ref name="LC2003263029">{{cite book |author=Robert K. Murray, Daryl K. Granner, Victor W. Rodwell |title=Harper’s illustrated biochemistry |publisher=Lange Medical Books/McGraw-Hill|edition=27th|url=http://www.accessmedicine.com/resourceTOC.aspx?resourceID=18 |chapter= |chapterurl= |location=New York|year=2006 |pages= |isbn= |oclc= |doi=|id={{LCC|QP514 .R4}} }} {{LCCN|2003|263|029}}</ref>

Stryer, Lubert; Berg, Jeremy Mark; Tymoczko, John L. (2002). Biochemistry. San Francisco: W.H. Freeman. ISBN 0-7167-3051-0. 

<ref name="isbn0-7167-3051-0">{{cite book |author=Stryer, Lubert; Berg, Jeremy Mark; Tymoczko, John L. |authorlink= |editor= |others= |title=Biochemistry |chapter= |chapterurl= |edition= |language= |publisher=W.H. Freeman |location=San Francisco |year=2002 |origyear= |pages= |quote= |isbn=0-7167-3051-0 |oclc= |doi= |url=http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=stryer |accessdate=}}</ref>

Physical diagnosis references

(1990) Walker HK, Hall WD, Hurst JW: Clinical methods: the history, physical, and laboratory examinations (in English), 3rd. London: Butterworths. LCC RC71 .C63. ISBN 0-409-90077-X.  Library of Congress

<ref name="isbn0-409-90077-X">{{cite book |author= |authorlink= |editor=Walker HK, Hall WD, Hurst JW |others= |title=Clinical methods: the history, physical, and laboratory examinations |edition=3rd |language=English |publisher=Butterworths |location=London |year=1990 |origyear= |pages= |quote= |isbn=0-409-90077-X |oclc= |doi= |url=http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=cm|chapter=|chapterurl= |accessdate=|id={{LCC|RC71 .C63}} }} [http://lccn.loc.gov/87013782 Library of Congress]</ref>

McGee, Steven R. (2007). Evidence-Based Physical Diagnosis. Philadelphia: Saunders. ISBN 1-4160-2898-6. 

<ref name="isbn1-4160-2898-6">{{cite book |author=McGee, Steven R. |authorlink= |editor= |others= |title=Evidence-Based Physical Diagnosis |edition= |language= |publisher=Saunders |location=Philadelphia |year=2007 |origyear= |chapter=|pages= |quote= |isbn=1-4160-2898-6 |oclc= |doi= |url= |accessdate=}}</ref>

Drummond Rennie; David Simel (2008). THE RATIONAL CLINICAL EXAMINATION: EVIDENCE-BASED CLINICAL DIAGNOSIS (Jama & Archives Journals). McGraw-Hill Professional. ISBN 0-07-159030-7. 

<ref name="0-07-159030-7">{{cite book |author=Drummond Rennie; David Simel |authorlink= |editor= |others= |title=THE RATIONAL CLINICAL EXAMINATION: EVIDENCE-BASED CLINICAL DIAGNOSIS (Jama & Archives Journals) |edition= |language= |publisher=McGraw-Hill Professional |location= |year=2008 |origyear= |pages= |quote= |isbn=0-07-159030-7 |oclc= |doi= |url= |accessdate=}}</ref>

Genomics

HuGE Navigator: http://www.hugenavigator.net/ Wei Yu, Marta Gwinn, Melinda Clyne, Ajay Yesupriya & Muin J Khoury. A Navigator for Human Genome Epidemiology. Nat Genet 40, 124 - 125 (2008) PubMed

OMIM: Online Mendelian Inheritance in Man, OMIM (TM). Johns Hopkins University, Baltimore, MD. MIM Number: {MIM number}: {Date last edited}: . World Wide Web URL: http://www.ncbi.nlm.nih.gov/omim/

Sources of health terminologies

• United States. Congress. House. Committee on Interstate and Foreign Commerce. Subcommittee on Health and the Environment. (1976). A discursive dictionary of health care / prepared by the staff for the use of the Subcommittee on Health and the Environment of the Committee on Interstate and Foreign Commerce, U.S. House of Representatives. Washington, DC: U.S. Government Printing Office. LCC RA423 .U54. LCCN 76-046
  • <ref name="LCCRA423.U54">{{cite book |author=United States. Congress. House. Committee on Interstate and Foreign Commerce. Subcommittee on Health and the Environment.|title=A discursive dictionary of health care / prepared by the staff for the use of the Subcommittee on Health and the Environment of the Committee on Interstate and Foreign Commerce, U.S. House of Representatives|publisher=U.S. Government Printing Office|location=Washington, DC|year=1976 |pages= |isbn= |oclc= |doi=|id={{LCC|RA423 .U54}} }}{{LCCN|76|601|046}}</ref>
• Timmreck, Thomas C. (1987). Dictionary of Health Services Management, 2nd. Owings Mill, Md.: National Health Publishing. LCC RA393 .T56. ISBN 0-932500-56-0. LCCN 86-614
  • <ref name="isbn0-932500-56-0">{{cite book |author=Timmreck, Thomas C. |authorlink= |editor= |others= |title=Dictionary of health services management |edition=2nd |language= |publisher=National Health Publishing |location=Owings Mill, Md. |year=1987 |origyear= |pages= |quote= |isbn=0-932500-56-0 |oclc= |doi= |url=id={{LCC|RA393 .T56}} |accessdate=}}{{LCCN|86|062|614}}</ref>
• U.S. Department of Health and Human Services AHRQ Effective Health Care Glossary

Evidence-based medicine, epidemiology, and statistics sources

• Anonymous (2006). “Normal Distribution”, NIST/SEMATECH e-Handbook of Statistical Methods. Gaithersburg, MD: National Institute of Standards and Technology. Retrieved on 2009-02-10. 
  • <ref name="urlNIST/SEMATECH e-Handbook of Statistical Methods">{{cite book |url=http://www.itl.nist.gov/div898/handbook/|chapterurl=http://www.itl.nist.gov/div898/handbook/eda/section3/eda3661.htm|chapter=Normal Distribution |title=NIST/SEMATECH e-Handbook of Statistical Methods |author=Anonymous |authorlink= |coauthors= |date=2006 |location=Gaithersburg, MD |work= |publisher=National Institute of Standards and Technology |pages= |language= |archiveurl= |archivedate= |quote= |accessdate=2009-02-10}}</ref>
• Trapp, Robert; Beth Dawson (2004). Basic & clinical biostatistics. New York: Lange Medical Books/McGraw-Hill. LCC QH323.5 .D38LCCN 2005-263. ISBN 0-07-141017-1. 
  • <ref name="isbn0-07-141017-1">{{cite book |author=Trapp, Robert; Beth Dawson |authorlink= |editor= |others= |title=Basic & clinical biostatistics |chapter=|chapterurl=|edition= |language= |publisher=Lange Medical Books/McGraw-Hill |location=New York |year=2004 |origyear= |pages= |quote= |isbn=0-07-141017-1 |oclc= |doi= |url=http://www.accessmedicine.com/resourceTOC.aspx?resourceID=62 |accessdate=|id={{LCC|QH323.5 .D38}}{{LCCN|2005|283|263}}}}</ref>
• Mosteller, Frederick; Bailar, John Christian (1992). Medical uses of statistics. Boston, Mass: NEJM Books. ISBN 0-910133-36-0.  Google Books
  • <ref name="isbn0-910133-36-0">{{cite book |author=Mosteller, Frederick; Bailar, John Christian |authorlink= |editor= |others= |title=Medical uses of statistics |edition= |language= |publisher=NEJM Books |location=Boston, Mass |year=1992 |origyear= |pages= |quote= |isbn=0-910133-36-0 |oclc= |doi= |url= |accessdate=}} [http://books.google.com/books?isbn=0910133360 Google Books]</ref>

Health Sciences Workgroup links

CZ:Health_Sciences_Workgroup

• [[Category:Health Sciences Workgroup]]

http://forum.citizendium.org

• Health Sciences Forum

Health Sciences Workgroup List

Other workgroups

• Library and Information Science Workgroup
  • CZ:Library and Information Science Workgroup
  • [[Category:Library and Information Science Workgroup]]
• Psychology Workgroup
  • CZ:Psychology Workgroup
  • [[Category:Psychology Workgroup]]

Robert Badgett Status    last updated    [edit plan here] Get your own infobox! • Group Status ~ Plans ~ Short term plans Click edit above to start this list Longer-term plans 1. Vet CZ:Proposals/Standardizing the naming of biomedical articles. with CZ_Talk:Health Sciences Workgroup as a way to standardize the titles and maybe the introductions of articles. Standardizing titles with an accepted terminology will help CZ in the future when Web 2 starts linking websites. 2. Help create standardized sections for health articles (eg diagnosis, treatment, prognosis) and drug articles (eg biochemistry, brand names, adverse effects), that can be subpages when articles become to bulky for a single page. 3. Further work on Template:2x2-rx as a way to embed interactive decision support in articles. Primitive example is at hypoalphalipoproteinemia. 4. Learn how to make common bioinformatics links to the databases at Entrez. Use antidiuretic hormone, platelet glycoprotein GPIIb-IIIa complex articles as examples. 5. Some day hope to improve referencing so eventually that eventually authors only have to write something like <ref>PMID 9718051</ref> and all referencing is handled using a web mash-up. ~ Roles and notes ~ Roles in the system 1. Executive Committee member 2. Health Sciences editor Notes to self Click edit above to start these notes Public notes :