Life/Bibliography: Difference between revisions
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*Park K ''et al.'' (2005) Self-organized scale-free networks. Phys Rev E Stat Nonlin Soft Matter Phys 72:026131 PMID 16196668 | *Park K ''et al.'' (2005) Self-organized scale-free networks. Phys Rev E Stat Nonlin Soft Matter Phys 72:026131 PMID 16196668 | ||
*Troisi A ''et al.''(2005) An agent-based approach for modeling molecular self-organization. Proc Natl Acad Sci USA 102:255-60 PMID 15625108 | *Troisi A ''et al.''(2005) An agent-based approach for modeling molecular self-organization. Proc Natl Acad Sci USA 102:255-60 PMID 15625108 | ||
*Koshland DE, Jr. (2002) [http://dx.doi.org/10.1126/science.1068489 Special essay. The seven pillars of life.] ''Science'' 295:2215-2216 PMID 11910092 | |||
:*The Seven Pillars: Program (DNA), Improvisation (evolution), Compartmentalization (boundary with environment), Energy (the flow of energy through the system), Regeneration (re-synthesis of parts), Adaptability (‘behavioral’ responsiveness), Seclusion (metabolic pathways do not have their privacy invaded). | |||
*Pace NR (2001) Special Feature: The universal nature of biochemistry. Proc Natl Acad Sci USA 98:[http://www.pnas.org/cgi/content/full/98/3/805/ 805-8]<br> | *Pace NR (2001) Special Feature: The universal nature of biochemistry. Proc Natl Acad Sci USA 98:[http://www.pnas.org/cgi/content/full/98/3/805/ 805-8]<br> | ||
*Dronamraju KR (1999) Erwin Schrodinger and the origins of molecular biology. [http://www.genetics.org Genetics] 153:1071-6 PMID 10545442 | *Dronamraju KR (1999) Erwin Schrodinger and the origins of molecular biology. [http://www.genetics.org Genetics] 153:1071-6 PMID 10545442 | ||
==Interviews and Commentaries== | ==Interviews and Commentaries== | ||
*Kauffman S. The Adjacent Possible: [http://www.edge.org/3rd_culture/kauffman03/kauffman_index.html/ A Talk with Stuart Kauffman] | *Kauffman S. The Adjacent Possible: [http://www.edge.org/3rd_culture/kauffman03/kauffman_index.html/ A Talk with Stuart Kauffman] |
Revision as of 16:19, 15 August 2007
A list of key readings about Life.
Books
- Schrodinger E (1944-2000) What is Life? Cambridge University Press (Canto). ISBN 0-521-42708-8 Chapter 6: Order, Disorder and Entropy (Prediction of hereditary molecule like a coded periodic crystal — Watson claims inspiration — Stresses open thermodynamic systems key to life.)
- Kaneko K (2006) Life: An Introduction to Complex Systems Biology. Springer, Berlin ISBN 3-540-32666-9
- Dill KA, Bromberg S, Stigter D (2003) Molecular Driving Forces: Statistical Thermodynamics in Chemistry and Biology. Garland Science, New York. ISBN 0-8153-2051-5
- Strogatz SH (2003) Sync: The Emerging Science of Spontaneous Order. Theia, New York ISBN 0-7868-6844-9
- Buchanan M (2002) Nexus: Small Worlds and the Groundbreaking Science of Networks. W.W. Norton, New York ISBN 0-393-04153-0
- Hoagland M, Dodson B, Hauck J (2001) Exploring the Way Life Works: The Science of Biology. Jones and Bartlett Publishers, Inc, Mississauga, Ontario ISBN 0-7637-1688-X (For young people. An illustrated text.)
- Solé R, Goodwin B (2000) Signs of Life: How Complexity Pervades Biology. Basic Books, Perseus Books Group, New York ISBN 0-465-01928-5
- Loewenstein WR (2000) The Touchstone of life: Molecular Information, Cell Communication, and the Foundations of Life. Oxford University Press ISBN 0-19-514057-5 Book Review and Chapter One
- Hoagland M, Dodson B (1998) The Way Life Works: The Science Lovers Illustrated Guide to How Life Grows, Develops, Reproduces, and Gets Along. Three Rivers Press, New York ISBN 0-8129-2888-1 (For young people. An illustrated text.)
- Margulis L, Sagan D (1995) What is Life? Simon & Schuster ISBN 0-684-81087-5
- Rosen R. (1991) Life Itself: A Comprehensive Inquiry Into The Nature, Origin, And Fabrication Of Life. Columbia University Press, New York. ISBN 0-231-07565-0
- Kauffman SA. (1993) The Origins of Order: Self-Organization and Selection in Evolution. Oxford University Press, New York. ISBN 0195058119
- Kauffman S. (1995) At Home in the Universe: The Search for Laws of Self-Organization and Complexity. Oxford University Press, New York. ISBN 0195095995
- Mayr E. (1997) Evolution and the Diversity of Life: Selected Essays. The Belknap Press of Harvard University Press, Cambridge, Massachusetts.
- Holland JH. (1998) Emergence: From Chaos to Order. Perseus Books, Cambridge. ISBN 0-7382-0142-1
- Haynie DT. (2001) Biological Thermodynamics. Cambridge University Press, Cambridge. ISBN 13-978-0-521-79549-4; 10-0-521-79165-0
- Harold FM. (2001) The Way of the Cell: Molecules, Organisms, and the Order of Life. Oxford University Press, Oxford. ISBN 0195135121
- Kirschner MW, Gerhart JC, Norton J. (2005) The Plausibility of Life: Resolving Darwin's Dilemma. Yale University Press, New Haven. ISBN 13-978-0-300-11977-0; 10-0-300-11977-1
- Reid RGB. (2007) Biological Emergences: Evolution by Natural Experiment. A Bradford Book, Cambridge . ISBN 10: 0-262-18257-2
Articles
- Epstein IR, Pojman JA, Steinbock O (2006) Introduction: Self-organization in nonequilibrium chemical systems. Chaos 16:037101 PMID 17014235
- Hazen R (2006) The Big Questions: What is Life? New Scientist Issue 2578, 46-51
- Marenduzzo D et al. (2006) Entropy-driven genome organization. Biophys J 90:3712-21 PMID 16500976
- Morowitz H, Smith E (2006) Energy flow and the organization of life
- Scheffer M, van Nes EH (2006) Self-organized similarity, the evolutionary emergence of groups of similar species. Proc Natl Acad Sci USA 103:6230-5 PMID 16585519
- Walsh DM (2006) Organisms as natural purposes: The contemporary evolutionary perspective. Studies in History and Philosophy of Science. Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 37:771-91 37:771-91
- Park K et al. (2005) Self-organized scale-free networks. Phys Rev E Stat Nonlin Soft Matter Phys 72:026131 PMID 16196668
- Troisi A et al.(2005) An agent-based approach for modeling molecular self-organization. Proc Natl Acad Sci USA 102:255-60 PMID 15625108
- Koshland DE, Jr. (2002) Special essay. The seven pillars of life. Science 295:2215-2216 PMID 11910092
- The Seven Pillars: Program (DNA), Improvisation (evolution), Compartmentalization (boundary with environment), Energy (the flow of energy through the system), Regeneration (re-synthesis of parts), Adaptability (‘behavioral’ responsiveness), Seclusion (metabolic pathways do not have their privacy invaded).
- Pace NR (2001) Special Feature: The universal nature of biochemistry. Proc Natl Acad Sci USA 98:805-8
- Dronamraju KR (1999) Erwin Schrodinger and the origins of molecular biology. Genetics 153:1071-6 PMID 10545442
Interviews and Commentaries
- Kauffman S. The Adjacent Possible: A Talk with Stuart Kauffman